gff_plot — gff_plot • BioVizSeq

Visualization of element in gff or gtf file

Usage

gff_plot(
  gff_file,
  the_order = NULL,
  shape = "Rect",
  r = 0.3,
  legend_size = 15,
  element_color = NULL
)

Arguments

gff_file: The path of gff file.
the_order: The path of order of mRNA. It is also the mRNA you want to showcase. A List of Gene ID , One ID Per Line.
shape: RoundRect or Rect.
r: The radius of rounded corners.
legend_size: The size of legend.
element_color: The color set of element.

Value

p

Author

Shiqi Zhao

Examples

gff_path <- system.file("extdata", "test.gff", package = "BioVizSeq")
gff_plot(gff_path)